Package: pedigree 1.4.2

pedigree: Pedigree Functions

Pedigree related functions.

Authors:Albart Coster [aut, cre]

# Install 'pedigree' in R:

install.packages('pedigree', repos = c('https://albartcoster.r-universe.dev', 'https://cloud.r-project.org'))

Uses libs:

On CRAN:

This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.

Last updated 2 years agofrom:857654213f. Checks:OK: 9. Indexed: yes.

Help page	Topics
Package to deal with pedigree data	pedigree-package pedigree
Function to add missing individuals to a pedigree	add.Inds
Function to calculate breeding values using an animal model	blup
Function to calculate a relationship matrix from marker data (usually allele count data), G matrix.	calcG
Calculates inbreeding coefficients for individuals in a pedigree.	calcInbreeding
Count generation number for each individual in a pedigree.	countGen
Function that counts the number of offspring (and following generations for each individual in a pedigree.	countOff
Function to calculate breeding values using an animal model and a relationship matrix calculated from the markers (G matrix)	gblup
Makes the A matrix for a part of a pedigree	makeA
Makes inverted A matrix for a pedigree	makeAinv
Orders a pedigree	orderPed
Function to trim a pedigree based on available data	trimPed